R packages
mitey
A lightweight R package with methods to estimate infectious disease dynamics parameters.
vacamole
An R package that features a deterministic age-structured compartmental susceptible-exposed-infectious-recovered (SEIR) model and supporting functions.
morevac
An R package that features a multi-annual, individual-based, stochastic, force of infection model that accounts for individual exposure histories and disease/vaccine dynamics influencing susceptibility.
Collaboration
Interested in contributing to any of these projects? Most repositories welcome contributions via GitHub issues and pull requests. For major collaborations or new project ideas, feel free to reach out via email.